Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14732 and 14733 are separated by 157 nucleotides14733 and 14734 are separated by 407 nucleotides14734 and 14735 are separated by 743 nucleotides14735 and 14736 are separated by 2124 nucleotides mRNA_6364: 14732 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 643,685 to 645,198 14732 mRNA_6365: 14733 - HMMPfam-Trypsin-like peptidase domain-PF13365,SUPERFAMILY--SSF50494, at 645,356 to 646,894 14733 mRNA_6366: 14734 - BLAST putative membrane permease [Rhizoctonia solani 123E], at 647,302 to 648,659 14734 mRNA_6367: 14735 - Hypothetical Protein, at 649,403 to 649,822 14735 mRNA_6368: 14736 - KOG2049 Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily), at 651,947 to 653,420 14736
Group Condition mRNA_6364 mRNA_6365 mRNA_6366 mRNA_6367 mRNA_6368
14732 14733 14734 14735 14736
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 -0.0 +0.4 N.D. -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.2 -0.2 -0.1 N.D. -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.1 -0.6 -0.1 N.D. -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 -0.3 N.D. -1.0
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.4 -0.0 N.D. -1.4
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 -0.5 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 -0.1 -0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 -0.3 N.D. -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.6 -0.1 N.D. +0.8
auxotrophy YNB Glucose -0.1 +0.3 -0.3 N.D. -0.6
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.3 +0.2 N.D. -0.8
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 -0.3 N.D. -0.4
growth on oleic acid YNB Oleic Acid +0.0 -0.4 -0.0 N.D. -0.1
growth on ypd YPD +1.4 -0.2 -0.2 N.D. -1.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.5 -0.2 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.1 +0.2 N.D. +0.3
auxotrophy Dropout Complete -0.3 +0.1 -0.2 N.D. +0.3
growth on oleic acid YNB Glucose +0.3 -0.1 -0.2 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.2 -0.2 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.5 -0.0 N.D. +0.8
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.3 -0.2 N.D. +1.2
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