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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14746 and 14747 are separated by 780 nucleotides
14747 and 14748 are separated by 474 nucleotides
14748 and 14749 are separated by 202 nucleotides
14749 and 14750 are separated by 581 nucleotides
mRNA_6378: 14746 - K11884 PNO1, DIM2 RNA-binding protein PNO1, at 675,035 to 675,906
14746
mRNA_6379: 14747 - Hypothetical Protein, at 676,687 to 677,946
14747
mRNA_6380: 14748 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 678,421 to 679,401
14748
mRNA_6381: 14749 - Interpro F-box-like, at 679,604 to 681,699
14749
mRNA_6382: 14750 - Hypothetical Protein, at 682,281 to 684,206
14750
Group
Condition
mRNA
_6378
mRNA
_6379
mRNA
_6380
mRNA
_6381
mRNA
_6382
14746
14747
14748
14749
14750
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
-0.7
-0.5
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
-0.7
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
-0.5
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.6
-0.5
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.0
-1.0
+0.3
+0.0
auxotrophy
YNB Glucose
N.D.
-0.5
-0.0
-0.1
-0.1
auxotrophy
Dropout Complete
N.D.
-0.4
-0.1
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
-0.5
-0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
+0.0
+0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
-0.4
+0.1
-0.2
growth on ypd
YPD
N.D.
-0.1
-0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.0
+0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.0
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
-0.3
-0.2
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.2
-0.3
+0.3
+0.2
growth on oleic acid
YNB Glucose
N.D.
-0.4
-0.2
+0.5
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
-0.1
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
+0.1
-0.0
+0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
+0.2
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.4
+0.6
+0.3
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+0.0
+0.4
+0.0
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