Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14748 and 14749 are separated by 202 nucleotides14749 and 14750 are separated by 581 nucleotides14750 and 14751 are separated by 440 nucleotides14751 and 14752 are separated by 291 nucleotides mRNA_6380: 14748 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 678,421 to 679,401 14748 mRNA_6381: 14749 - Interpro F-box-like, at 679,604 to 681,699 14749 mRNA_6382: 14750 - Hypothetical Protein, at 682,281 to 684,206 14750 mRNA_6383: 14751 - Hypothetical Protein, at 684,647 to 685,455 14751 mRNA_6384: 14752 - K13201 TIA1, TIAL1 nucleolysin TIA-1/TIAR, at 685,747 to 687,315 14752
Group Condition mRNA_6380 mRNA_6381 mRNA_6382 mRNA_6383 mRNA_6384
14748 14749 14750 14751 14752
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -0.5 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 -0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.1 -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.3 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.5 +0.5 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.2 +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.1 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.1 -0.5 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 -0.4 N.D. N.D.
auxotrophy Dropout Complete -0.1 -0.1 -0.2 N.D. N.D.
growth on ypd YPD -0.1 -0.1 -0.1 N.D. N.D.
auxotrophy YNB Glucose -0.0 -0.1 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.2 -0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.3 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 +0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.4 +0.0 N.D. N.D.
growth on oleic acid YNB Glucose -0.2 +0.5 +0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.3 -0.1 N.D. N.D.
remove
mRNA_6380
plot
remove
mRNA_6381
plot
remove
mRNA_6382
remove
mRNA_6383
plot
remove
mRNA_6384
plot