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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14750 and 14751 are separated by 440 nucleotides
14751 and 14752 are separated by 291 nucleotides
14752 and 14753 are separated by 430 nucleotides
14753 and 14754 are separated by 540 nucleotides
mRNA_6382: 14750 - Hypothetical Protein, at 682,281 to 684,206
14750
mRNA_6383: 14751 - Hypothetical Protein, at 684,647 to 685,455
14751
mRNA_6384: 14752 - K13201 TIA1, TIAL1 nucleolysin TIA-1/TIAR, at 685,747 to 687,315
14752
mRNA_6385: 14753 - K03107 SRP68 signal recognition particle subunit SRP68, at 687,746 to 690,070
14753
mRNA_6386: 14754 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 690,611 to 691,768
14754
Group
Condition
mRNA
_6382
mRNA
_6383
mRNA
_6384
mRNA
_6385
mRNA
_6386
14750
14751
14752
14753
14754
growth on ypd
YPD
-0.1
N.D.
N.D.
-1.2
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
N.D.
N.D.
-1.7
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
N.D.
-0.9
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
N.D.
N.D.
-1.0
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.4
N.D.
N.D.
-1.5
+0.4
auxotrophy
YNB Glucose
-0.1
N.D.
N.D.
-1.5
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
N.D.
-1.3
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
N.D.
-0.9
-0.1
growth on oleic acid
YNB Glucose
+0.2
N.D.
N.D.
-1.2
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
N.D.
-1.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
N.D.
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
N.D.
N.D.
-1.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
N.D.
N.D.
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
N.D.
-0.3
-0.4
auxotrophy
Dropout Complete
-0.2
N.D.
N.D.
-0.7
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
N.D.
N.D.
+0.3
-0.7
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
N.D.
+0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
N.D.
-0.0
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
N.D.
+1.5
-1.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
N.D.
+0.8
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
N.D.
N.D.
+0.9
+0.4
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