Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14756 and 14757 are separated by 376 nucleotides14757 and 14758 are separated by 355 nucleotides14758 and 14759 are separated by 424 nucleotides14759 and 14760 are separated by 284 nucleotides mRNA_6388: 14756 - HMMPfam-BRCA1 C Terminus (BRCT) domain-PF00533,ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113, at 693,931 to 695,622 14756 mRNA_6389: 14757 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 695,999 to 699,737 14757 mRNA_6390: 14758 - KOG0605 NDR and related serine/threonine kinases, at 700,093 to 702,768 14758 mRNA_6391: 14759 - K11558 SPC25 kinetochore protein Spc25, fungi type, at 703,193 to 704,324 14759 mRNA_6392: 14760 - KOG4533 Uncharacterized conserved protein, at 704,609 to 706,220 14760
Group Condition mRNA_6388 mRNA_6389 mRNA_6390 mRNA_6391 mRNA_6392
14756 14757 14758 14759 14760
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.2 -0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.1 -0.5 N.D. +0.2
growth on ypd YPD -0.5 +0.0 +0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 -0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 -0.3 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.3 -0.4 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 +0.1 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 +0.5 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 -0.6 N.D. +0.6
growth on ricinoleic acid YNB Glucose +0.1 +0.2 +0.0 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 +0.1 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 +0.2 N.D. +0.6
growth on oleic acid YNB Glucose +0.3 +0.2 +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.4 +0.2 N.D. +0.2
auxotrophy YNB Glucose +0.3 +0.2 +0.3 N.D. +0.1
auxotrophy Dropout Complete +0.2 +0.4 +0.2 N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.3 +0.3 N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.2 +0.4 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.2 +0.2 N.D. +0.7
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