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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14762 and 14763 are separated by 308 nucleotides
14763 and 14764 are separated by 690 nucleotides
14764 and 14765 are separated by 856 nucleotides
14765 and 14766 are separated by 447 nucleotides
mRNA_6394: 14762 - HMMPfam-Asparagine synthase-PF00733,SUPERFAMILY--SSF52402,SUPERFAMILY--SSF56235, at 710,467 to 712,891
14762
mRNA_6395: 14763 - K19403 MCPH1 microcephalin, at 713,200 to 716,170
14763
mRNA_6396: 14764 - Hypothetical Protein, at 716,861 to 718,717
14764
mRNA_6397: 14765 - K02976 RP-S26e, RPS26 small subunit ribosomal protein S26e, at 719,574 to 720,317
14765
mRNA_6398: 14766 - K14556 DIP2, UTP12, WDR3 U3 small nucleolar RNA-associated protein 12, at 720,765 to 724,339
14766
Group
Condition
mRNA
_6394
mRNA
_6395
mRNA
_6396
mRNA
_6397
mRNA
_6398
14762
14763
14764
14765
14766
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.5
-0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
-0.1
N.D.
N.D.
growth on oleic acid
YNB Glucose
-0.3
-0.2
-0.0
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
+0.1
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
-0.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
+0.0
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.1
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.2
-0.0
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
+0.1
N.D.
N.D.
growth on ypd
YPD
+0.0
-0.2
-0.0
N.D.
N.D.
auxotrophy
YNB Glucose
-0.1
-0.1
+0.1
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
+0.0
N.D.
N.D.
auxotrophy
Dropout Complete
+0.0
-0.1
+0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.2
-0.1
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
-0.0
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.0
+0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.2
+0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.1
+0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
+0.1
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.3
-0.1
N.D.
N.D.
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