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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14764 and 14765 are separated by 856 nucleotides
14765 and 14766 are separated by 447 nucleotides
14766 and 14767 are separated by 1 nucleotides
14767 and 14768 are separated by 423 nucleotides
mRNA_6396: 14764 - Hypothetical Protein, at 716,861 to 718,717
14764
mRNA_6397: 14765 - K02976 RP-S26e, RPS26 small subunit ribosomal protein S26e, at 719,574 to 720,317
14765
mRNA_6398: 14766 - K14556 DIP2, UTP12, WDR3 U3 small nucleolar RNA-associated protein 12, at 720,765 to 724,339
14766
mRNA_6399: 14767 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959, at 724,341 to 725,780
14767
mRNA_6400: 14768 - K15720 N4BP2 NEDD4-binding protein 2, at 726,204 to 728,180
14768
Group
Condition
mRNA
_6396
mRNA
_6397
mRNA
_6398
mRNA
_6399
mRNA
_6400
14764
14765
14766
14767
14768
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
N.D.
-0.8
-0.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
N.D.
-0.3
-1.2
growth on ypd
YPD
-0.0
N.D.
N.D.
-0.3
-1.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
N.D.
-0.3
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
N.D.
N.D.
-0.4
-0.7
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
N.D.
-0.6
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
N.D.
-0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
N.D.
-0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
N.D.
N.D.
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
N.D.
-0.2
-0.4
growth on oleic acid
YNB Glucose
-0.0
N.D.
N.D.
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
N.D.
-0.3
-0.1
auxotrophy
YNB Glucose
+0.1
N.D.
N.D.
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
N.D.
-0.3
-0.1
auxotrophy
Dropout Complete
+0.1
N.D.
N.D.
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
N.D.
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
N.D.
-0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
N.D.
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
N.D.
-0.2
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
N.D.
+0.0
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
N.D.
N.D.
+0.3
-0.1
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