Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14776 and 14777 are separated by 250 nucleotides14777 and 14778 are separated by 641 nucleotides14778 and 14779 are separated by 1197 nucleotides14779 and 14780 are separated by 196 nucleotides mRNA_6408: 14776 - K19308 BMT6 25S rRNA (uracil2843-N3)-methyltransferase, at 740,308 to 741,629 14776 mRNA_6409: 14777 - KOG2806 Chitinase, at 741,880 to 743,909 14777 mRNA_6410: 14778 - HMMPfam-Peptidase inhibitor I9-PF05922,SUPERFAMILY--SSF54897, at 744,551 to 744,938 14778 mRNA_6411: 14779 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 746,136 to 749,829 14779 mRNA_6412: 14780 - HMMPfam-F-box-like-PF12937, at 750,026 to 751,228 14780
Group Condition mRNA_6408 mRNA_6409 mRNA_6410 mRNA_6411 mRNA_6412
14776 14777 14778 14779 14780
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.3 -0.4 -0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.0 -0.6 +0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.3 -0.6 -0.4
auxotrophy YNB Glucose -0.4 -0.0 -0.6 +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -0.3 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.0 -0.3 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.2 -0.2 +0.8 -0.3
growth on ypd YPD -0.2 +0.2 +0.4 -0.7 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 +0.0 -0.5 +0.1
growth on ricinoleic acid YNB Glucose +0.0 +0.1 +0.3 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -1.1 +1.4 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.1 -1.0 +0.8 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 -0.1 +0.0 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.2 +0.7 +0.5
growth on oleic acid YNB Glucose +0.2 -0.0 -0.2 +1.2 -0.0
auxotrophy Dropout Complete +0.0 -0.0 -0.3 +1.5 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.0 -0.3 +1.0 +0.7
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.3 +0.2 +1.8 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.4 +0.5 +0.8 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.4 +0.5 +1.2 +0.3
growth on oleic acid YNB Oleic Acid +0.2 +0.2 +0.1 +2.8 +0.3
remove
mRNA_6408
plot
remove
mRNA_6409
plot
remove
mRNA_6410
remove
mRNA_6411
plot
remove
mRNA_6412
plot