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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14783 and 14784 are separated by 373 nucleotides
14784 and 14785 are separated by 609 nucleotides
14785 and 14786 are separated by 267 nucleotides
14786 and 14787 are separated by 416 nucleotides
mRNA_6415: 14783 - Hypothetical Protein, at 756,737 to 757,520
14783
mRNA_6416: 14784 - Hypothetical Protein, at 757,894 to 758,331
14784
mRNA_6417: 14785 - Hypothetical Protein, at 758,941 to 760,073
14785
mRNA_6418: 14786 - K02127 ATPeF0B, ATP5F1, ATP4 F-type H+-transporting ATPase subunit b, at 760,341 to 761,286
14786
mRNA_6419: 14787 - KOG0744 AAA+-type ATPase, at 761,703 to 763,959
14787
Group
Condition
mRNA
_6415
mRNA
_6416
mRNA
_6417
mRNA
_6418
mRNA
_6419
14783
14784
14785
14786
14787
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-0.4
-0.0
N.D.
-0.4
growth on ypd
YPD
-0.8
-0.3
+0.3
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-1.1
+0.0
+0.3
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.4
+0.3
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
+0.2
+0.0
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
+0.1
+0.3
N.D.
-0.3
auxotrophy
Dropout Complete
-0.9
+0.1
+0.5
N.D.
-0.2
auxotrophy
YNB Glucose
-0.4
+0.1
+0.1
N.D.
-0.3
growth on oleic acid
YNB Oleic Acid
-0.6
+0.2
+0.3
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.2
+0.4
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.3
-1.0
N.D.
+0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.8
+0.2
+0.5
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.0
-0.0
N.D.
+0.2
growth on oleic acid
YNB Glucose
-0.4
+0.6
+0.3
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.4
+0.9
+0.1
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
-0.1
+0.4
+0.4
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
+1.2
+0.0
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+1.1
-0.1
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.6
+0.4
-0.0
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
+0.8
N.D.
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.1
+0.3
+0.4
N.D.
+0.2
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