Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14788 and 14789 are separated by 215 nucleotides14789 and 14790 are separated by 0 nucleotides14790 and 14791 are separated by 412 nucleotides14791 and 14792 are separated by 86 nucleotides mRNA_6420: 14788 - K14263 BNA7 kynurenine formamidase, at 764,043 to 765,055 14788 mRNA_6421: 14789 - SUPERFAMILY--SSF82199, at 765,271 to 766,029 14789 mRNA_6422: 14790 - KOG2084 Predicted histone tail methylase containing SET domain, at 766,030 to 767,975 14790 mRNA_6423: 14791 - Hypothetical Protein, at 768,388 to 769,029 14791 mRNA_6424: 14792 - Hypothetical Protein, at 769,116 to 769,372 14792
Group Condition mRNA_6420 mRNA_6421 mRNA_6422 mRNA_6423 mRNA_6424
14788 14789 14790 14791 14792
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.8 -0.8 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.9 +0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.8 -0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -1.0 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.4 -0.3 -0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.8 -0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.1 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.6 +0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 -0.5 N.D. N.D.
auxotrophy Dropout Complete +0.1 -0.5 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.0 -0.2 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 -0.4 N.D. N.D.
auxotrophy YNB Glucose +0.2 -0.6 +0.1 N.D. N.D.
growth on ypd YPD -0.1 +0.4 -0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.3 -0.5 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.2 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.4 -0.2 N.D. N.D.
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