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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14790 and 14791 are separated by 412 nucleotides
14791 and 14792 are separated by 86 nucleotides
14792 and 14793 are separated by 109 nucleotides
14793 and 14794 are separated by 294 nucleotides
mRNA_6422: 14790 - KOG2084 Predicted histone tail methylase containing SET domain, at 766,030 to 767,975
14790
mRNA_6423: 14791 - Hypothetical Protein, at 768,388 to 769,029
14791
mRNA_6424: 14792 - Hypothetical Protein, at 769,116 to 769,372
14792
mRNA_6425: 14793 - SUPERFAMILY--SSF52047, at 769,482 to 770,429
14793
mRNA_6426: 14794 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 770,724 to 773,097
14794
Group
Condition
mRNA
_6422
mRNA
_6423
mRNA
_6424
mRNA
_6425
mRNA
_6426
14790
14791
14792
14793
14794
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
N.D.
-1.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
N.D.
N.D.
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
N.D.
N.D.
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
N.D.
-0.7
N.D.
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
N.D.
-0.7
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
N.D.
N.D.
-0.8
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
N.D.
-0.8
N.D.
auxotrophy
Dropout Complete
-0.1
N.D.
N.D.
-0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
N.D.
N.D.
+0.2
N.D.
growth on oleic acid
YNB Glucose
-0.2
N.D.
N.D.
-0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
N.D.
-0.5
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
N.D.
-0.5
N.D.
growth on ypd
YPD
-0.3
N.D.
N.D.
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
N.D.
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
N.D.
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
N.D.
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
N.D.
-0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.4
N.D.
N.D.
-0.3
N.D.
auxotrophy
YNB Glucose
+0.1
N.D.
N.D.
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.3
N.D.
N.D.
-0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
N.D.
+0.3
N.D.
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