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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14795 and 14796 are separated by 854 nucleotides
14796 and 14797 are separated by 1096 nucleotides
14797 and 14798 are separated by 369 nucleotides
14798 and 14799 are separated by 380 nucleotides
mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773,204 to 778,326
14795
mRNA_6428: 14796 - KOG2208 Vigilin, at 779,181 to 783,068
14796
mRNA_6429: 14797 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 784,165 to 784,634
14797
mRNA_6430: 14798 - KOG3112 Uncharacterized conserved protein, at 785,004 to 786,145
14798
mRNA_6431: 14799 - Hypothetical Protein, at 786,526 to 787,659
14799
Group
Condition
mRNA
_6427
mRNA
_6428
mRNA
_6429
mRNA
_6430
mRNA
_6431
14795
14796
14797
14798
14799
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-1.3
+0.6
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.0
-0.6
-0.5
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.2
-0.3
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
+0.1
-0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.2
-0.7
-0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.3
+0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.2
+0.1
-0.4
+0.3
auxotrophy
YNB Glucose
-0.0
+0.1
-0.1
-0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
-0.4
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.1
-0.3
+0.6
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
-0.1
+0.2
+0.0
growth on oleic acid
YNB Glucose
+0.0
+0.1
-0.1
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.1
+0.3
+0.3
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.4
-0.5
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.3
+0.6
-0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.2
+0.2
-0.2
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.7
-0.7
-0.0
+0.5
auxotrophy
Dropout Complete
+0.2
+0.3
+0.2
-0.5
+0.7
growth on ypd
YPD
+0.1
-0.1
+1.1
+0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.9
+0.6
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.6
+1.8
-0.3
+0.6
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