Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14800 and 14801 are separated by 542 nucleotides
14801 and 14802 are separated by 197 nucleotides
14802 and 14803 are separated by 232 nucleotides
14803 and 14804 are separated by 192 nucleotides
mRNA_6432: 14800 - K18203 LCMT1 [phosphatase 2A protein]-leucine-carboxy methyltransferase, at 788,062 to 789,443
14800
mRNA_6433: 14801 - K12180 COPS7, CSN7 COP9 signalosome complex subunit 7, at 789,986 to 791,469
14801
mRNA_6434: 14802 - K01904 4CL 4-coumarate--CoA ligase, at 791,667 to 793,929
14802
mRNA_6435: 14803 - K01930 FPGS folylpolyglutamate synthase, at 794,162 to 796,213
14803
mRNA_6436: 14804 - SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 796,406 to 797,649
14804
Group
Condition
mRNA
_6432
mRNA
_6433
mRNA
_6434
mRNA
_6435
mRNA
_6436
14800
14801
14802
14803
14804
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-1.1
-0.1
N.D.
-0.5
growth on ricinoleic acid
YNB Glucose
+0.2
-0.6
-0.1
N.D.
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.5
-0.1
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.3
-0.1
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.9
-0.1
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.2
+0.3
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
-0.1
N.D.
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.2
-0.1
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.6
+0.0
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.1
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.3
+0.1
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.3
+0.0
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.3
+0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
+0.1
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.5
+0.2
-0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.4
+0.0
-0.0
N.D.
+0.1
auxotrophy
YNB Glucose
+0.3
+0.2
+0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.4
+0.2
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.3
+0.2
N.D.
-0.1
auxotrophy
Dropout Complete
+0.6
+0.1
-0.0
N.D.
+0.3
growth on ypd
YPD
+0.5
+0.3
-0.1
N.D.
+0.4
remove
mRNA_6432
plot
remove
mRNA_6433
plot
remove
mRNA_6434
remove
mRNA_6435
plot
remove
mRNA_6436
plot