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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14804 and 14805 are separated by 275 nucleotides
14805 and 14806 are separated by 370 nucleotides
14806 and 14807 are separated by 189 nucleotides
14807 and 14808 are separated by 439 nucleotides
mRNA_6436: 14804 - SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 796,406 to 797,649
14804
mRNA_6437: 14805 - K07511 ECHS1 enoyl-CoA hydratase, at 797,925 to 799,246
14805
mRNA_6438: 14806 - K15456 KTI12 protein KTI12, at 799,617 to 800,834
14806
mRNA_6439: 14807 - Hypothetical Protein, at 801,024 to 801,752
14807
mRNA_6440: 14808 - Hypothetical Protein, at 802,192 to 802,893
14808
Group
Condition
mRNA
_6436
mRNA
_6437
mRNA
_6438
mRNA
_6439
mRNA
_6440
14804
14805
14806
14807
14808
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-4.2
+0.5
+0.7
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-4.0
+0.2
+1.1
+0.0
growth on oleic acid
YNB Oleic Acid
-0.0
-2.9
+0.3
+0.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
-1.9
-0.4
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.4
-0.7
+0.0
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.1
-1.4
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.1
-1.0
-0.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.3
-0.1
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.5
-1.3
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.1
-0.6
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.0
+0.0
-0.4
+0.1
growth on ypd
YPD
+0.4
+0.5
-0.9
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
+0.2
-0.3
-0.2
auxotrophy
YNB Glucose
-0.0
+0.1
-0.6
+0.2
+0.2
growth on ricinoleic acid
YNB Glucose
-0.4
+0.3
+0.0
+0.4
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.4
-0.5
+0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.1
+0.6
-0.2
-0.4
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.2
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.2
-0.4
+0.3
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.1
+0.9
-0.3
+0.1
auxotrophy
Dropout Complete
+0.3
-0.1
+0.3
+0.3
+0.2
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