Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14805 and 14806 are separated by 370 nucleotides14806 and 14807 are separated by 189 nucleotides14807 and 14808 are separated by 439 nucleotides14808 and 14809 are separated by 131 nucleotides mRNA_6437: 14805 - K07511 ECHS1 enoyl-CoA hydratase, at 797,925 to 799,246 14805 mRNA_6438: 14806 - K15456 KTI12 protein KTI12, at 799,617 to 800,834 14806 mRNA_6439: 14807 - Hypothetical Protein, at 801,024 to 801,752 14807 mRNA_6440: 14808 - Hypothetical Protein, at 802,192 to 802,893 14808 mRNA_6441: 14809 - K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit, at 803,025 to 805,267 14809
Group Condition mRNA_6437 mRNA_6438 mRNA_6439 mRNA_6440 mRNA_6441
14805 14806 14807 14808 14809
growth on ricinoleic acid YNB Ricinoleic Acid -4.2 +0.5 +0.7 -0.2 -4.5
growth on ricinoleic acid YNB Methylricinoleic Acid -4.0 +0.2 +1.1 +0.0 -4.6
growth on oleic acid YNB Oleic Acid -2.9 +0.3 +0.6 -0.1 -3.8
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.7 +0.0 -0.8 -2.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -1.4 -0.1 +0.0 -1.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -1.9 -0.4 +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 -0.1 -0.6 -1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -1.0 -0.4 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -1.3 -0.2 +0.1 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.6 -0.2 +0.1 -0.9
growth on ypd YPD +0.5 -0.9 -0.2 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.3 -0.2 -0.5
auxotrophy YNB Glucose +0.1 -0.6 +0.2 +0.2 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.4 +0.3 +0.2 -0.7
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.5 +0.2 +0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 -0.4 +0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.9 -0.3 +0.1 -1.0
growth on ricinoleic acid YNB Glucose +0.3 +0.0 +0.4 -0.4 -0.4
growth on oleic acid YNB Glucose -0.1 +0.2 +0.0 +0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.6 -0.2 -0.4 +0.2
auxotrophy Dropout Complete -0.1 +0.3 +0.3 +0.2 -0.5
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