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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14806 and 14807 are separated by 189 nucleotides
14807 and 14808 are separated by 439 nucleotides
14808 and 14809 are separated by 131 nucleotides
14809 and 14810 are separated by 40 nucleotides
mRNA_6438: 14806 - K15456 KTI12 protein KTI12, at 799,617 to 800,834
14806
mRNA_6439: 14807 - Hypothetical Protein, at 801,024 to 801,752
14807
mRNA_6440: 14808 - Hypothetical Protein, at 802,192 to 802,893
14808
mRNA_6441: 14809 - K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit, at 803,025 to 805,267
14809
mRNA_6442: 14810 - Hypothetical Protein, at 805,308 to 806,483
14810
Group
Condition
mRNA
_6438
mRNA
_6439
mRNA
_6440
mRNA
_6441
mRNA
_6442
14806
14807
14808
14809
14810
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
+0.0
-0.8
-2.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.7
-0.2
-4.5
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+1.1
+0.0
-4.6
+0.3
growth on oleic acid
YNB Oleic Acid
+0.3
+0.6
-0.1
-3.8
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.4
-0.1
+0.0
-1.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-1.9
-0.4
+0.0
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
-0.6
-1.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.3
-0.2
+0.1
-0.6
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.0
-0.4
+0.2
-0.4
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-0.2
+0.1
-0.9
+0.2
growth on ypd
YPD
-0.9
-0.2
-0.1
-0.1
+0.1
auxotrophy
YNB Glucose
-0.6
+0.2
+0.2
-0.6
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.3
+0.2
-0.7
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.3
-0.2
-0.5
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.2
+0.0
-0.5
+0.3
growth on ricinoleic acid
YNB Glucose
+0.0
+0.4
-0.4
-0.4
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.4
+0.1
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.9
-0.3
+0.1
-1.0
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-0.2
-0.4
+0.2
+0.1
growth on oleic acid
YNB Glucose
+0.2
+0.0
+0.1
-0.2
+0.2
auxotrophy
Dropout Complete
+0.3
+0.3
+0.2
-0.5
+0.4
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