Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14807 and 14808 are separated by 439 nucleotides14808 and 14809 are separated by 131 nucleotides14809 and 14810 are separated by 40 nucleotides14810 and 14811 are separated by 414 nucleotides mRNA_6439: 14807 - Hypothetical Protein, at 801,024 to 801,752 14807 mRNA_6440: 14808 - Hypothetical Protein, at 802,192 to 802,893 14808 mRNA_6441: 14809 - K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit, at 803,025 to 805,267 14809 mRNA_6442: 14810 - Hypothetical Protein, at 805,308 to 806,483 14810 mRNA_6443: 14811 - K10427 DCTN5 dynactin 5, at 806,898 to 807,775 14811
Group Condition mRNA_6439 mRNA_6440 mRNA_6441 mRNA_6442 mRNA_6443
14807 14808 14809 14810 14811
growth on ricinoleic acid YNB Methylricinoleic Acid +1.1 +0.0 -4.6 +0.3 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.2 -4.5 +0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.8 -2.4 +0.3 -0.4
growth on oleic acid YNB Oleic Acid +0.6 -0.1 -3.8 +0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 -0.5 +0.3 -2.7
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 -0.7 +0.1 -2.4
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2 -0.5 +0.3 -1.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.6 -1.2 +0.2 -0.2
auxotrophy YNB Glucose +0.2 +0.2 -0.6 +0.2 -1.7
growth on ypd YPD -0.2 -0.1 -0.1 +0.1 -1.3
auxotrophy Dropout Complete +0.3 +0.2 -0.5 +0.4 -2.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.1 +0.0 +0.2 -1.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 -1.0 +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.0 -0.1 +0.1 -1.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.4 +0.2 +0.1 -0.9
growth on ricinoleic acid YNB Glucose +0.4 -0.4 -0.4 +0.1 -0.7
growth on oleic acid YNB Glucose +0.0 +0.1 -0.2 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.0 -1.3 +0.3 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 -0.9 +0.2 +1.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 -0.6 +0.1 +2.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.2 -0.4 +0.4 +2.3
remove
mRNA_6439
plot
remove
mRNA_6440
plot
remove
mRNA_6441
remove
mRNA_6442
plot
remove
mRNA_6443
plot