Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14809 and 14810 are separated by 40 nucleotides14810 and 14811 are separated by 414 nucleotides14811 and 14812 are separated by 630 nucleotides14812 and 14813 are separated by 805 nucleotides mRNA_6441: 14809 - K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit, at 803,025 to 805,267 14809 mRNA_6442: 14810 - Hypothetical Protein, at 805,308 to 806,483 14810 mRNA_6443: 14811 - K10427 DCTN5 dynactin 5, at 806,898 to 807,775 14811 mRNA_6444: 14812 - Hypothetical Protein, at 808,406 to 809,831 14812 mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810,637 to 814,255 14813
Group Condition mRNA_6441 mRNA_6442 mRNA_6443 mRNA_6444 mRNA_6445
14809 14810 14811 14812 14813
growth on ricinoleic acid YNB Methylricinoleic Acid -4.6 +0.3 -1.3 -0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -4.5 +0.2 -0.3 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.1 -2.4 +0.1 -0.1
growth on oleic acid YNB Oleic Acid -3.8 +0.1 +0.5 +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.3 -2.7 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -2.4 +0.3 -0.4 +0.0 -0.1
auxotrophy YNB Glucose -0.6 +0.2 -1.7 +0.2 -0.1
auxotrophy Dropout Complete -0.5 +0.4 -2.0 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.3 -1.7 +0.1 +0.1
growth on ypd YPD -0.1 +0.1 -1.3 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 -1.4 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.2 -0.4 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -1.0 +0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.1 -0.7 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -1.2 +0.2 -0.2 +0.1 +0.1
growth on oleic acid YNB Glucose -0.2 +0.2 -0.4 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.1 -0.9 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 +0.3 +0.8 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 +0.2 +1.6 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.4 +2.3 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.1 +2.3 +0.1 +0.4
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