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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14811 and 14812 are separated by 630 nucleotides
14812 and 14813 are separated by 805 nucleotides
14813 and 14814 are separated by 146 nucleotides
14814 and 14815 are separated by 23 nucleotides
mRNA_6443: 14811 - K10427 DCTN5 dynactin 5, at 806,898 to 807,775
14811
mRNA_6444: 14812 - Hypothetical Protein, at 808,406 to 809,831
14812
mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810,637 to 814,255
14813
mRNA_6446: 14814 - Hypothetical Protein, at 814,402 to 816,229
14814
mRNA_6447: 14815 - Hypothetical Protein, at 816,253 to 817,256
14815
Group
Condition
mRNA
_6443
mRNA
_6444
mRNA
_6445
mRNA
_6446
mRNA
_6447
14811
14812
14813
14814
14815
auxotrophy
YNB Glucose 75mM Methionine
-2.7
+0.1
-0.1
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-2.4
+0.1
-0.1
+0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
-1.7
+0.1
+0.1
+0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-1.4
-0.1
+0.0
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.0
-0.1
-0.1
-0.9
ypd buoyancy
40 hrs Low Buoyancy
-1.0
+0.1
-0.2
+0.1
-0.4
auxotrophy
YNB Glucose
-1.7
+0.2
-0.1
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.3
-0.0
+0.0
-0.2
+0.1
auxotrophy
Dropout Complete
-2.0
+0.2
+0.1
+0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
+0.1
+0.2
-0.5
-0.1
growth on ypd
YPD
-1.3
-0.1
-0.0
+0.1
+0.2
growth on oleic acid
YNB Glucose
-0.4
+0.1
-0.1
+0.1
-0.5
growth on oleic acid
YNB Oleic Acid
+0.5
+0.2
+0.2
-0.1
-1.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
+0.1
+0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.1
-0.0
-0.1
+0.2
growth on ricinoleic acid
YNB Glucose
-0.7
-0.1
-0.0
+0.0
+0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.1
-0.1
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
-0.0
+0.2
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.6
+0.0
+0.0
-0.0
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+2.3
+0.0
+0.1
+0.1
+1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+2.3
+0.1
+0.4
+0.2
+0.8
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