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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14813 and 14814 are separated by 146 nucleotides
14814 and 14815 are separated by 23 nucleotides
14815 and 14816 are separated by 327 nucleotides
14816 and 14817 are separated by 428 nucleotides
mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810,637 to 814,255
14813
mRNA_6446: 14814 - Hypothetical Protein, at 814,402 to 816,229
14814
mRNA_6447: 14815 - Hypothetical Protein, at 816,253 to 817,256
14815
mRNA_6448: 14816 - HMMPfam-F-box-like-PF12937, at 817,584 to 818,438
14816
mRNA_6449: 14817 - HMMPfam-Protein of unknown function (DUF1399)-PF07173, at 818,867 to 821,319
14817
Group
Condition
mRNA
_6445
mRNA
_6446
mRNA
_6447
mRNA
_6448
mRNA
_6449
14813
14814
14815
14816
14817
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.5
-0.5
-0.3
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
-1.5
+0.3
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
-0.4
-0.5
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
-0.9
+0.4
+0.1
growth on ypd
YPD
-0.0
+0.1
+0.2
-1.0
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
-0.0
-0.4
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.5
-0.1
+0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
+0.3
-0.7
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
-0.3
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.0
+0.0
-0.2
+0.3
auxotrophy
Dropout Complete
+0.1
+0.2
+0.2
+0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.2
+0.1
+0.7
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.0
+0.1
+0.4
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
-0.4
+0.9
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.1
+0.2
+0.8
-0.0
auxotrophy
YNB Glucose
-0.1
+0.1
+0.2
+0.6
+0.1
growth on ricinoleic acid
YNB Glucose
-0.0
+0.0
+0.8
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.0
+0.7
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
+0.5
+0.5
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.2
+0.8
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
+1.0
+0.1
+0.1
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