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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14814 and 14815 are separated by 23 nucleotides
14815 and 14816 are separated by 327 nucleotides
14816 and 14817 are separated by 428 nucleotides
14817 and 14818 are separated by 649 nucleotides
mRNA_6446: 14814 - Hypothetical Protein, at 814,402 to 816,229
14814
mRNA_6447: 14815 - Hypothetical Protein, at 816,253 to 817,256
14815
mRNA_6448: 14816 - HMMPfam-F-box-like-PF12937, at 817,584 to 818,438
14816
mRNA_6449: 14817 - HMMPfam-Protein of unknown function (DUF1399)-PF07173, at 818,867 to 821,319
14817
mRNA_6450: 14818 - Hypothetical Protein, at 821,969 to 822,682
14818
Group
Condition
mRNA
_6446
mRNA
_6447
mRNA
_6448
mRNA
_6449
mRNA
_6450
14814
14815
14816
14817
14818
growth on oleic acid
YNB Glucose
+0.1
-0.5
-0.5
-0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-1.5
+0.3
+0.0
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.1
+0.2
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.4
-0.5
+0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
+0.0
-0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
-0.4
+0.1
-0.2
growth on ypd
YPD
+0.1
+0.2
-1.0
+0.3
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.9
+0.4
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.0
-0.2
+0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
+0.7
-0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.3
-0.7
+0.0
+0.6
auxotrophy
Dropout Complete
+0.2
+0.2
+0.0
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
+0.4
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
+0.8
+0.4
-0.2
-0.4
auxotrophy
YNB Glucose
+0.1
+0.2
+0.6
+0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.2
+0.8
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.4
+0.9
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.7
+0.3
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.8
-0.2
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+1.0
+0.1
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.5
+0.5
+0.1
+0.1
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