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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14815 and 14816 are separated by 327 nucleotides
14816 and 14817 are separated by 428 nucleotides
14817 and 14818 are separated by 649 nucleotides
14818 and 14819 are separated by 852 nucleotides
mRNA_6447: 14815 - Hypothetical Protein, at 816,253 to 817,256
14815
mRNA_6448: 14816 - HMMPfam-F-box-like-PF12937, at 817,584 to 818,438
14816
mRNA_6449: 14817 - HMMPfam-Protein of unknown function (DUF1399)-PF07173, at 818,867 to 821,319
14817
mRNA_6450: 14818 - Hypothetical Protein, at 821,969 to 822,682
14818
mRNA_6451: 14819 - Hypothetical Protein, at 823,535 to 824,941
14819
Group
Condition
mRNA
_6447
mRNA
_6448
mRNA
_6449
mRNA
_6450
mRNA
_6451
14815
14816
14817
14818
14819
growth on oleic acid
YNB Glucose
-0.5
-0.5
-0.3
-0.3
-0.0
growth on oleic acid
YNB Oleic Acid
-1.5
+0.3
+0.0
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.5
+0.0
+0.2
-0.1
growth on ypd
YPD
+0.2
-1.0
+0.3
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.4
+0.1
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.0
-0.0
-0.3
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
+0.4
+0.1
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.2
+0.3
-0.2
+0.0
growth on ricinoleic acid
YNB Glucose
+0.8
+0.4
-0.2
-0.4
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.7
+0.0
+0.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.7
-0.1
-0.3
-0.3
auxotrophy
YNB Glucose
+0.2
+0.6
+0.1
-0.3
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.2
-0.0
-0.2
+0.3
auxotrophy
Dropout Complete
+0.2
+0.0
-0.0
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.4
+0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.8
-0.0
+0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.9
+0.0
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
+0.3
+0.1
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
-0.2
+0.1
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
+0.1
+0.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.5
+0.5
+0.1
+0.1
-0.1
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