Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14822 and 14823 are separated by 159 nucleotides
14823 and 14824 are separated by 363 nucleotides
14824 and 14825 are separated by 148 nucleotides
14825 and 14826 are separated by 442 nucleotides
mRNA_6454: 14822 - BLAST putative nucleoporin-interacting protein NIC96 [Rhizo..., at 828,916 to 829,758
14822
mRNA_6455: 14823 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 829,918 to 832,599
14823
mRNA_6456: 14824 - KOG3386 Copper transporter, at 832,963 to 833,757
14824
mRNA_6457: 14825 - Hypothetical Protein, at 833,906 to 834,580
14825
mRNA_6458: 14826 - K01193 INV, sacA beta-fructofuranosidase, at 835,023 to 837,288
14826
Group
Condition
mRNA
_6454
mRNA
_6455
mRNA
_6456
mRNA
_6457
mRNA
_6458
14822
14823
14824
14825
14826
growth on oleic acid
YNB Glucose
N.D.
-0.1
-1.4
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.6
-1.0
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.7
-0.0
-0.3
+0.0
auxotrophy
YNB Glucose
N.D.
-0.1
-0.8
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
-1.7
+0.7
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.6
-0.8
+0.5
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.3
-0.7
+0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.8
+0.0
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.0
+0.1
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
-0.4
-0.5
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.3
-0.7
+0.3
auxotrophy
Dropout Complete
N.D.
+0.0
-0.5
-0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
-0.0
+0.0
-0.0
growth on ypd
YPD
N.D.
+0.1
-0.6
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
-0.6
+0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.3
+0.6
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.1
+0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
-0.0
+1.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.5
+0.7
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.4
+0.0
+1.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.4
+0.1
+1.1
+0.1
remove
mRNA_6454
plot
remove
mRNA_6455
plot
remove
mRNA_6456
remove
mRNA_6457
plot
remove
mRNA_6458
plot