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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14826 and 14827 are separated by 59 nucleotides
14827 and 14828 are separated by 696 nucleotides
14828 and 14829 are separated by 402 nucleotides
14829 and 14830 are separated by 487 nucleotides
mRNA_6458: 14826 - K01193 INV, sacA beta-fructofuranosidase, at 835,023 to 837,288
14826
mRNA_6459: 14827 - BLAST beta-fructofuranosidase [Cryptococcus gattii VGIV IND..., at 837,348 to 837,887
14827
mRNA_6460: 14828 - K10427 DCTN5 dynactin 5, at 838,584 to 839,457
14828
mRNA_6461: 14829 - Hypothetical Protein, at 839,860 to 840,668
14829
mRNA_6462: 14830 - Hypothetical Protein, at 841,156 to 842,746
14830
Group
Condition
mRNA
_6458
mRNA
_6459
mRNA
_6460
mRNA
_6461
mRNA
_6462
14826
14827
14828
14829
14830
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
N.D.
N.D.
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
N.D.
-0.1
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
N.D.
N.D.
+0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
N.D.
+0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
N.D.
+0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
N.D.
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
N.D.
+0.0
-0.1
growth on ypd
YPD
+0.1
N.D.
N.D.
-0.1
+0.1
growth on oleic acid
YNB Glucose
-0.0
N.D.
N.D.
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
N.D.
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
N.D.
N.D.
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
N.D.
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
N.D.
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
N.D.
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
N.D.
+0.1
+0.2
auxotrophy
YNB Glucose
+0.1
N.D.
N.D.
+0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
N.D.
N.D.
+0.2
+0.4
growth on ricinoleic acid
YNB Glucose
+0.0
N.D.
N.D.
+0.1
+0.6
auxotrophy
Dropout Complete
+0.2
N.D.
N.D.
+0.4
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
N.D.
+0.3
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
N.D.
+0.1
+0.6
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