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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14828 and 14829 are separated by 402 nucleotides
14829 and 14830 are separated by 487 nucleotides
14830 and 14831 are separated by 1417 nucleotides
14831 and 14832 are separated by 169 nucleotides
mRNA_6460: 14828 - K10427 DCTN5 dynactin 5, at 838,584 to 839,457
14828
mRNA_6461: 14829 - Hypothetical Protein, at 839,860 to 840,668
14829
mRNA_6462: 14830 - Hypothetical Protein, at 841,156 to 842,746
14830
mRNA_6463: 14831 - K10427 DCTN5 dynactin 5, at 844,164 to 845,248
14831
mRNA_6464: 14832 - KOG1609 Protein involved in mRNA turnover and stability, at 845,418 to 846,912
14832
Group
Condition
mRNA
_6460
mRNA
_6461
mRNA
_6462
mRNA
_6463
mRNA
_6464
14828
14829
14830
14831
14832
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.7
-0.1
-2.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.2
-2.4
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
-0.4
+0.4
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
+0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.4
-1.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
+0.1
-0.3
-0.1
growth on ypd
YPD
N.D.
-0.1
+0.1
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
+0.1
-1.0
+0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
+0.2
+0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
+0.5
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.2
+0.6
+0.0
auxotrophy
YNB Glucose
N.D.
+0.2
+0.3
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.1
+0.2
+0.3
growth on oleic acid
YNB Glucose
N.D.
+0.1
+0.1
+0.5
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
+0.0
+0.6
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
+0.0
+0.9
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.0
+1.0
+0.1
auxotrophy
Dropout Complete
N.D.
+0.4
+0.3
+0.4
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.2
+1.3
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.6
+1.8
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
+0.6
+1.6
+0.3
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