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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14831 and 14832 are separated by 169 nucleotides
14832 and 14833 are separated by 157 nucleotides
14833 and 14834 are separated by 689 nucleotides
14834 and 14835 are separated by 294 nucleotides
mRNA_6463: 14831 - K10427 DCTN5 dynactin 5, at 844,164 to 845,248
14831
mRNA_6464: 14832 - KOG1609 Protein involved in mRNA turnover and stability, at 845,418 to 846,912
14832
mRNA_6465: 14833 - Hypothetical Protein, at 847,070 to 847,704
14833
mRNA_6466: 14834 - Hypothetical Protein, at 848,394 to 849,782
14834
mRNA_6467: 14835 - K20242 EVI5 ecotropic viral integration site 5 protein, at 850,077 to 853,413
14835
Group
Condition
mRNA
_6463
mRNA
_6464
mRNA
_6465
mRNA
_6466
mRNA
_6467
14831
14832
14833
14834
14835
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-2.4
-0.5
-0.3
+0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-2.4
-0.1
+0.3
-0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-1.2
+0.3
-0.2
+0.0
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
-0.6
-0.2
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
+0.7
-0.0
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.5
-0.0
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
+0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.6
-0.1
-0.1
+0.2
auxotrophy
YNB Glucose
+0.1
+0.1
+0.2
-0.2
+0.1
growth on ypd
YPD
-0.1
+0.1
-0.1
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.3
+0.3
+0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.3
+0.4
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
+0.6
+0.0
+0.1
-0.1
+0.1
auxotrophy
Dropout Complete
+0.4
+0.4
+0.2
-0.2
+0.0
growth on oleic acid
YNB Glucose
+0.5
+0.2
+0.3
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.9
+0.1
+0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.6
+0.1
+0.3
+0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.3
+0.2
+0.2
-0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.6
+0.3
-0.1
+0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
+1.0
+0.1
+0.6
-0.0
+0.1
growth on ricinoleic acid
YNB Glucose
+1.8
+0.1
+0.5
-0.0
-0.3
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