Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14836 and 14837 are separated by 111 nucleotides
14837 and 14838 are separated by 396 nucleotides
14838 and 14839 are separated by 355 nucleotides
14839 and 14840 are separated by 96 nucleotides
mRNA_6468: 14836 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 853,896 to 857,931
14836
mRNA_6469: 14837 - K10625 UBR1 E3 ubiquitin-protein ligase UBR1, at 858,043 to 864,348
14837
mRNA_6470: 14838 - Hypothetical Protein, at 864,745 to 865,870
14838
mRNA_6471: 14839 - KOG0806 Carbon-nitrogen hydrolase, at 866,226 to 867,912
14839
mRNA_6472: 14840 - Hypothetical Protein, at 868,009 to 868,986
14840
Group
Condition
mRNA
_6468
mRNA
_6469
mRNA
_6470
mRNA
_6471
mRNA
_6472
14836
14837
14838
14839
14840
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-1.0
+0.1
+0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.7
+0.1
-0.5
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
-0.5
+0.0
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
-0.3
-0.1
+0.0
auxotrophy
YNB Glucose
N.D.
-0.0
-0.4
-0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.9
-0.1
+0.3
+0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
-0.2
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.0
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
-0.4
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.0
-0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.6
+0.4
+0.0
+0.3
auxotrophy
Dropout Complete
N.D.
+0.3
-0.3
-0.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
+0.1
-0.0
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
+0.2
-0.4
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
+0.5
+0.2
+0.0
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.2
+0.1
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.1
-0.2
+0.4
growth on ypd
YPD
N.D.
+0.7
-0.0
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
-0.0
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.4
+0.1
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.6
+0.4
+0.3
+0.1
remove
mRNA_6468
plot
remove
mRNA_6469
plot
remove
mRNA_6470
remove
mRNA_6471
plot
remove
mRNA_6472
plot