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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14838 and 14839 are separated by 355 nucleotides
14839 and 14840 are separated by 96 nucleotides
14840 and 14841 are separated by 295 nucleotides
14841 and 14842 are separated by 392 nucleotides
mRNA_6470: 14838 - Hypothetical Protein, at 864,745 to 865,870
14838
mRNA_6471: 14839 - KOG0806 Carbon-nitrogen hydrolase, at 866,226 to 867,912
14839
mRNA_6472: 14840 - Hypothetical Protein, at 868,009 to 868,986
14840
mRNA_6473: 14841 - HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723, at 869,282 to 871,336
14841
mRNA_6474: 14842 - HMMPfam-Vitamin-D-receptor interacting Mediator subunit 4-PF10018, at 871,729 to 872,994
14842
Group
Condition
mRNA
_6470
mRNA
_6471
mRNA
_6472
mRNA
_6473
mRNA
_6474
14838
14839
14840
14841
14842
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.1
+0.0
-0.0
-0.0
auxotrophy
YNB Glucose
-0.4
-0.1
+0.0
+0.1
+0.2
growth on ypd
YPD
-0.0
-0.1
+0.0
-0.4
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.5
+0.2
-0.4
+0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
+0.1
+0.3
-0.2
growth on oleic acid
YNB Glucose
-0.2
+0.1
+0.3
-0.3
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.2
+0.4
-0.3
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.0
+0.1
+0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
+0.0
+0.4
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.4
+0.4
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.2
+0.0
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.3
+0.2
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.0
+0.3
+0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.1
+0.3
+0.2
+0.2
auxotrophy
Dropout Complete
-0.3
-0.0
+0.2
+0.1
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.2
-0.2
-0.3
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.0
+0.3
+0.2
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
+0.2
+0.5
-0.2
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.3
+0.4
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.3
+0.1
+0.6
-0.5
growth on ricinoleic acid
YNB Glucose
+0.0
-0.0
-0.1
-0.1
+1.2
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