Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14840 and 14841 are separated by 295 nucleotides14841 and 14842 are separated by 392 nucleotides14842 and 14843 are separated by 211 nucleotides14843 and 14844 are separated by 227 nucleotides mRNA_6472: 14840 - Hypothetical Protein, at 868,009 to 868,986 14840 mRNA_6473: 14841 - HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723, at 869,282 to 871,336 14841 mRNA_6474: 14842 - HMMPfam-Vitamin-D-receptor interacting Mediator subunit 4-PF10018, at 871,729 to 872,994 14842 mRNA_6475: 14843 - KOG3442 Uncharacterized conserved protein, at 873,206 to 873,968 14843 mRNA_6476: 14844 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 874,196 to 881,716 14844
Group Condition mRNA_6472 mRNA_6473 mRNA_6474 mRNA_6475 mRNA_6476
14840 14841 14842 14843 14844
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.3 -0.5 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.3 -0.0 N.D. -0.2
growth on oleic acid YNB Glucose +0.3 -0.3 +0.0 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 -0.0 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 -0.3 N.D. +0.0
growth on ypd YPD +0.0 -0.4 +0.3 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 -0.2 N.D. -0.0
auxotrophy YNB Glucose +0.0 +0.1 +0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.2 -0.2 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.0 +0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.6 -0.5 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 +0.9 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.1 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.1 +0.2 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.4 +0.5 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.4 +0.2 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.5 -0.2 +0.4 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 +0.2 N.D. +0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 +1.2 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.2 +0.4 N.D. +0.4
auxotrophy Dropout Complete +0.2 +0.1 +0.6 N.D. +0.2
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