Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14842 and 14843 are separated by 211 nucleotides14843 and 14844 are separated by 227 nucleotides14844 and 14845 are separated by 723 nucleotides14845 and 14846 are separated by 674 nucleotides mRNA_6474: 14842 - HMMPfam-Vitamin-D-receptor interacting Mediator subunit 4-PF10018, at 871,729 to 872,994 14842 mRNA_6475: 14843 - KOG3442 Uncharacterized conserved protein, at 873,206 to 873,968 14843 mRNA_6476: 14844 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 874,196 to 881,716 14844 mRNA_6477: 14845 - HMMPfam-Catalytic LigB subunit of aromatic ring-opening dioxygenase-PF02900,SUPERFAMILY--SSF53213, at 882,440 to 883,452 14845 mRNA_6478: 14846 - K15442 TAD3, ADAT3 tRNA-specific adenosine deaminase 3, at 884,127 to 886,487 14846
Group Condition mRNA_6474 mRNA_6475 mRNA_6476 mRNA_6477 mRNA_6478
14842 14843 14844 14845 14846
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. -0.0 -1.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. +0.3 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 N.D. +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.0 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.0 -0.7 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.1 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. +0.0 -0.2 N.D.
growth on oleic acid YNB Glucose +0.0 N.D. -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.1 -0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.0 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. -0.2 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. +0.2 -0.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.9 N.D. +0.2 -1.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. +0.4 -0.6 N.D.
growth on oleic acid YNB Oleic Acid +0.4 N.D. +0.0 -0.3 N.D.
auxotrophy YNB Glucose +0.2 N.D. +0.0 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.0 +0.1 N.D.
growth on ypd YPD +0.3 N.D. +0.2 -0.3 N.D.
auxotrophy Dropout Complete +0.6 N.D. +0.2 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.0 +0.2 N.D.
growth on ricinoleic acid YNB Glucose +1.2 N.D. +0.0 -0.4 N.D.
remove
mRNA_6474
plot		 remove
mRNA_6475
plot		 remove
mRNA_6476		 remove
mRNA_6477
plot		 remove
mRNA_6478
plot