Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14845 and 14846 are separated by 674 nucleotides14846 and 14847 are separated by 2469 nucleotides14847 and 14848 are separated by 505 nucleotides14848 and 14849 are separated by 320 nucleotides mRNA_6477: 14845 - HMMPfam-Catalytic LigB subunit of aromatic ring-opening dioxygenase-PF02900,SUPERFAMILY--SSF53213, at 882,440 to 883,452 14845 mRNA_6478: 14846 - K15442 TAD3, ADAT3 tRNA-specific adenosine deaminase 3, at 884,127 to 886,487 14846 mRNA_6479: 14847 - K07378 NLGN neuroligin, at 888,957 to 890,595 14847 mRNA_6480: 14848 - Hypothetical Protein, at 891,101 to 891,716 14848 mRNA_6481: 14849 - K02201 E2.7.7.3B pantetheine-phosphate adenylyltransferase, at 892,037 to 893,331 14849
Group Condition mRNA_6477 mRNA_6478 mRNA_6479 mRNA_6480 mRNA_6481
14845 14846 14847 14848 14849
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 N.D. -0.3 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 N.D. -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -1.0 N.D. +0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 N.D. -0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 N.D. -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. +0.0 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. +0.0 N.D. N.D.
auxotrophy Dropout Complete -0.4 N.D. +0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.1 N.D. N.D.
growth on ypd YPD -0.3 N.D. -0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.5 N.D. +0.3 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -0.2 N.D. N.D.
growth on oleic acid YNB Glucose -0.2 N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose -0.0 N.D. -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.1 N.D. N.D.
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