Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14851 and 14852 overlap by 11 nucleotides14852 and 14853 are separated by 1881 nucleotides14853 and 14854 are separated by 499 nucleotides14854 and 14855 are separated by 775 nucleotides mRNA_6483: 14851 - Hypothetical Protein, at 894,956 to 895,414 14851 mRNA_6484: 14852 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 895,404 to 896,559 14852 mRNA_6485: 14853 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 898,441 to 899,753 14853 mRNA_6486: 14854 - K08294 MKK1_2 mitogen-activated protein kinase kinase, at 900,253 to 901,810 14854 mRNA_6487: 14855 - K11237 BEM1 bud emergence protein 1, at 902,586 to 904,816 14855
Group Condition mRNA_6483 mRNA_6484 mRNA_6485 mRNA_6486 mRNA_6487
14851 14852 14853 14854 14855
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.1 -1.6 +0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 -0.4 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.5 -0.4 -0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.4 -0.1 -0.0 -0.1
growth on ypd YPD -0.6 +0.3 -0.4 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.2 +0.5 -0.0 +0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.1 -0.1 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +1.0 +0.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 +0.2 +0.2 +0.8
auxotrophy YNB Glucose +0.2 -0.6 -0.1 +0.5 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.4 +0.2 +0.0 +0.6
growth on oleic acid YNB Glucose -0.0 +0.2 -0.1 -0.0 +0.7
auxotrophy Dropout Complete +0.6 -0.5 +0.2 +0.2 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.3 +0.9 +0.7 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +1.0 -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.6 +0.3 +0.6 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.0 +1.2 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 +1.2 +0.1 +0.5
growth on ricinoleic acid YNB Glucose +0.2 +0.3 +0.4 +0.5 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.2 +0.9 +0.6 +1.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.1 +1.1 +0.7 +1.2
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