Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14854 and 14855 are separated by 775 nucleotides14855 and 14856 are separated by 355 nucleotides14856 and 14857 are separated by 394 nucleotides14857 and 14858 are separated by 359 nucleotides mRNA_6486: 14854 - K08294 MKK1_2 mitogen-activated protein kinase kinase, at 900,253 to 901,810 14854 mRNA_6487: 14855 - K11237 BEM1 bud emergence protein 1, at 902,586 to 904,816 14855 mRNA_6488: 14856 - K01655 LYS21, LYS20 homocitrate synthase, at 905,172 to 907,549 14856 mRNA_6489: 14857 - KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases, at 907,944 to 911,303 14857 mRNA_6490: 14858 - KOG1698 Mitochondrial/chloroplast ribosomal protein L19, at 911,663 to 912,456 14858
Group Condition mRNA_6486 mRNA_6487 mRNA_6488 mRNA_6489 mRNA_6490
14854 14855 14856 14857 14858
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.5 -3.2 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.5 -3.9 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 -3.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.6 -4.3 +0.9 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.4 -4.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.5 -3.2 -0.0 N.D.
growth on oleic acid YNB Glucose -0.0 +0.7 -3.8 +0.8 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.7 -4.3 +0.9 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 -2.8 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.8 -3.1 +0.2 N.D.
auxotrophy YNB Glucose +0.5 +0.6 -3.9 +0.9 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.2 -1.0 -0.7 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.7 -2.9 +1.0 N.D.
growth on ricinoleic acid YNB Glucose +0.5 +0.6 -2.7 +0.7 N.D.
growth on ypd YPD +0.3 -0.2 -0.7 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.4 -0.5 +0.2 N.D.
auxotrophy Dropout Complete +0.2 +0.6 -1.5 +1.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +1.0 -2.8 +1.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.7 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 +0.9 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +1.2 -2.0 +1.2 N.D.
remove
mRNA_6486
plot
remove
mRNA_6487
plot
remove
mRNA_6488
remove
mRNA_6489
plot
remove
mRNA_6490
plot