Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14860 and 14861 are separated by 156 nucleotides14861 and 14862 are separated by 256 nucleotides14862 and 14863 are separated by 393 nucleotides14863 and 14864 are separated by 265 nucleotides mRNA_6492: 14860 - KOG3269 Predicted membrane protein, at 918,835 to 919,868 14860 mRNA_6493: 14861 - K20301 TRAPPC2, TRS20 trafficking protein particle complex subunit 2, at 920,025 to 920,861 14861 mRNA_6494: 14862 - KOG2885 Uncharacterized conserved protein, at 921,118 to 925,522 14862 mRNA_6495: 14863 - Hypothetical Protein, at 925,916 to 926,829 14863 mRNA_6496: 14864 - HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520, at 927,095 to 927,579 14864
Group Condition mRNA_6492 mRNA_6493 mRNA_6494 mRNA_6495 mRNA_6496
14860 14861 14862 14863 14864
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 N.D. -0.7 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. -0.4 -0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. -0.0 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. -0.4 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. -0.5 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 N.D. +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.2 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.2 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.3 +0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.7 +0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.0 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.6 N.D. -0.1 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.0 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.3 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. +0.1 +0.5 N.D.
growth on ypd YPD +0.2 N.D. -0.0 +0.2 N.D.
auxotrophy YNB Glucose -0.2 N.D. +0.1 +0.5 N.D.
growth on oleic acid YNB Glucose +0.1 N.D. +0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. +0.1 +0.2 N.D.
auxotrophy Dropout Complete +0.2 N.D. +0.1 +0.5 N.D.
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