Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14865 and 14866 are separated by 147 nucleotides
14866 and 14867 are separated by 53 nucleotides
14867 and 14868 are separated by 1812 nucleotides
14868 and 14869 are separated by 238 nucleotides
mRNA_6497: 14865 - HMMPfam-Peptidase family M28-PF04389,SUPERFAMILY--SSF53187, at 927,670 to 929,364
14865
mRNA_6498: 14866 - K00226 pyrD dihydroorotate dehydrogenase (fumarate), at 929,512 to 931,049
14866
mRNA_6499: 14867 - K12668 OST2, DAD1 oligosaccharyltransferase complex subunit epsilon, at 931,103 to 931,809
14867
mRNA_6500: 14868 - K14416 HBS1 elongation factor 1 alpha-like protein, at 933,622 to 935,186
14868
mRNA_6501: 14869 - K06902 UMF1 MFS transporter, UMF1 family, at 935,425 to 937,523
14869
Group
Condition
mRNA
_6497
mRNA
_6498
mRNA
_6499
mRNA
_6500
mRNA
_6501
14865
14866
14867
14868
14869
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
-3.7
N.D.
+0.9
-0.0
auxotrophy
YNB Glucose
-0.2
-0.5
N.D.
-1.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.5
N.D.
-1.0
+0.3
growth on ypd
YPD
-0.0
-0.7
N.D.
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
N.D.
-0.9
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.8
N.D.
-0.7
+0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
N.D.
-0.5
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
N.D.
-0.1
-0.4
growth on ricinoleic acid
YNB Glucose
+0.1
+0.4
N.D.
-1.3
-0.0
auxotrophy
Dropout Complete
+0.2
-0.4
N.D.
-0.7
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.0
N.D.
-0.8
-0.1
growth on oleic acid
YNB Glucose
+0.1
-0.2
N.D.
-0.6
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.4
N.D.
-0.6
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
N.D.
-0.4
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.3
N.D.
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.3
N.D.
-0.4
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.1
N.D.
-0.4
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.0
N.D.
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.0
N.D.
+0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.3
N.D.
-0.6
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.3
N.D.
+0.2
+0.3
remove
mRNA_6497
plot
remove
mRNA_6498
plot
remove
mRNA_6499
remove
mRNA_6500
plot
remove
mRNA_6501
plot