Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14869 and 14870 are separated by 316 nucleotides
14870 and 14871 are separated by 640 nucleotides
14871 and 14872 are separated by 391 nucleotides
14872 and 14873 are separated by 429 nucleotides
mRNA_6501: 14869 - K06902 UMF1 MFS transporter, UMF1 family, at 935,425 to 937,523
14869
mRNA_6502: 14870 - K02971 RP-S21e, RPS21 small subunit ribosomal protein S21e, at 937,840 to 938,370
14870
mRNA_6503: 14871 - K11360 SPT8 transcriptional activator SPT8, at 939,011 to 940,996
14871
mRNA_6504: 14872 - Hypothetical Protein, at 941,388 to 943,563
14872
mRNA_6505: 14873 - Hypothetical Protein, at 943,993 to 944,857
14873
Group
Condition
mRNA
_6501
mRNA
_6502
mRNA
_6503
mRNA
_6504
mRNA
_6505
14869
14870
14871
14872
14873
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
N.D.
+0.3
+0.2
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
-0.5
+0.1
-0.2
growth on ypd
YPD
-0.4
N.D.
+0.0
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
N.D.
+0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
N.D.
+0.1
+0.3
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
N.D.
+0.2
-0.1
-0.4
growth on ricinoleic acid
YNB Glucose
-0.0
N.D.
-0.3
+0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
N.D.
+0.4
-0.7
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
N.D.
-0.0
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
-0.4
+0.0
+0.0
auxotrophy
YNB Glucose
+0.0
N.D.
+0.2
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
N.D.
-0.0
+0.3
-0.2
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
+0.6
-0.4
-0.1
growth on oleic acid
YNB Glucose
+0.1
N.D.
+0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.6
-0.1
-0.1
auxotrophy
Dropout Complete
+0.1
N.D.
+0.1
-0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.4
N.D.
+0.2
+0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
+0.2
+0.0
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.1
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
N.D.
+0.1
+0.2
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.3
N.D.
+0.6
-0.1
+0.1
remove
mRNA_6501
plot
remove
mRNA_6502
plot
remove
mRNA_6503
remove
mRNA_6504
plot
remove
mRNA_6505
plot