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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14871 and 14872 are separated by 391 nucleotides
14872 and 14873 are separated by 429 nucleotides
14873 and 14874 are separated by 408 nucleotides
14874 and 14875 are separated by 333 nucleotides
mRNA_6503: 14871 - K11360 SPT8 transcriptional activator SPT8, at 939,011 to 940,996
14871
mRNA_6504: 14872 - Hypothetical Protein, at 941,388 to 943,563
14872
mRNA_6505: 14873 - Hypothetical Protein, at 943,993 to 944,857
14873
mRNA_6506: 14874 - KOG2712 Transcriptional coactivator, at 945,266 to 946,046
14874
mRNA_6507: 14875 - K09503 DNAJA2 DnaJ homolog subfamily A member 2, at 946,380 to 948,172
14875
Group
Condition
mRNA
_6503
mRNA
_6504
mRNA
_6505
mRNA
_6506
mRNA
_6507
14871
14872
14873
14874
14875
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.7
-0.2
-1.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.1
-0.2
-0.8
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.2
-0.6
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.0
-0.2
-0.5
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.0
+0.0
-0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.3
-0.2
-0.4
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.2
-0.3
-0.2
N.D.
growth on oleic acid
YNB Glucose
+0.1
-0.1
+0.2
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.3
-0.4
-0.1
N.D.
auxotrophy
YNB Glucose
+0.2
-0.1
-0.0
-0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.0
+0.3
-0.6
N.D.
auxotrophy
Dropout Complete
+0.1
-0.0
+0.2
-0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
+0.1
-0.3
N.D.
growth on ypd
YPD
+0.0
-0.0
-0.0
+0.4
N.D.
growth on oleic acid
YNB Oleic Acid
+0.6
-0.4
-0.1
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.2
+0.0
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
-0.2
+0.9
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.6
-0.1
+0.1
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
-0.1
-0.1
+0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.1
-0.0
+1.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.1
-0.4
+1.8
N.D.
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