Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14882 and 14883 are separated by 149 nucleotides14883 and 14884 are separated by 344 nucleotides14884 and 14885 are separated by 262 nucleotides14885 and 14886 are separated by 123 nucleotides mRNA_6514: 14882 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 968,322 to 969,938 14882 mRNA_6515: 14883 - K16578 CLASP1_2 CLIP-associating protein 1/2, at 970,088 to 973,817 14883 mRNA_6516: 14884 - Hypothetical Protein, at 974,162 to 975,105 14884 mRNA_6517: 14885 - K12879 THOC2 THO complex subunit 2, at 975,368 to 982,291 14885 mRNA_6518: 14886 - K05712 mhpA 3-(3-hydroxy-phenyl)propionate hydroxylase, at 982,415 to 984,966 14886
Group Condition mRNA_6514 mRNA_6515 mRNA_6516 mRNA_6517 mRNA_6518
14882 14883 14884 14885 14886
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 +0.2 -0.6 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 -0.6 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.3 -0.9 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.2 +0.6 N.D. -0.3
growth on ypd YPD +0.7 +0.2 -1.6 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.3 +0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 -0.2 N.D. -0.2
growth on oleic acid YNB Glucose -0.5 +0.0 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.2 +0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.0 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.0 -0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.2 -0.3 N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 +1.1 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.1 +0.3 N.D. -0.0
growth on ricinoleic acid YNB Glucose -0.1 +0.3 +0.0 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 +0.5 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.0 +0.0 N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.2 -0.0 N.D. +0.1
auxotrophy YNB Glucose +0.4 +0.2 +0.0 N.D. +0.1
auxotrophy Dropout Complete +0.1 +0.0 +0.2 N.D. +0.4
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