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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14885 and 14886 are separated by 123 nucleotides
14886 and 14887 are separated by 291 nucleotides
14887 and 14888 are separated by 272 nucleotides
14888 and 14889 are separated by 340 nucleotides
mRNA_6517: 14885 - K12879 THOC2 THO complex subunit 2, at 975,368 to 982,291
14885
mRNA_6518: 14886 - K05712 mhpA 3-(3-hydroxy-phenyl)propionate hydroxylase, at 982,415 to 984,966
14886
mRNA_6519: 14887 - K11806 WDSOF1 WD repeat and SOF domain-containing protein 1, at 985,258 to 987,431
14887
mRNA_6520: 14888 - K06883 K06883 uncharacterized protein, at 987,704 to 989,005
14888
mRNA_6521: 14889 - K14788 NOL10, ENP2 ribosome biogenesis protein ENP2, at 989,346 to 992,026
14889
Group
Condition
mRNA
_6517
mRNA
_6518
mRNA
_6519
mRNA
_6520
mRNA
_6521
14885
14886
14887
14888
14889
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.2
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
N.D.
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.1
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.0
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
N.D.
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
N.D.
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose
N.D.
+0.1
N.D.
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
N.D.
N.D.
N.D.
growth on ypd
YPD
N.D.
+0.1
N.D.
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
N.D.
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
N.D.
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
N.D.
N.D.
N.D.
auxotrophy
Dropout Complete
N.D.
+0.4
N.D.
N.D.
N.D.
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