Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14889 and 14890 are separated by 252 nucleotides14890 and 14891 are separated by 1364 nucleotides14891 and 14892 are separated by 308 nucleotides14892 and 14893 are separated by 282 nucleotides mRNA_6521: 14889 - K14788 NOL10, ENP2 ribosome biogenesis protein ENP2, at 989,346 to 992,026 14889 mRNA_6522: 14890 - K19871 SALL sal-like protein, at 992,279 to 994,205 14890 mRNA_6523: 14891 - K14567 UTP14 U3 small nucleolar RNA-associated protein 14, at 995,570 to 999,222 14891 mRNA_6524: 14892 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 999,531 to 1,001,982 14892 mRNA_6525: 14893 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1,002,265 to 1,003,923 14893
Group Condition mRNA_6521 mRNA_6522 mRNA_6523 mRNA_6524 mRNA_6525
14889 14890 14891 14892 14893
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 N.D. +0.1 -1.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 N.D. -0.2 -0.6
growth on ricinoleic acid YNB Glucose N.D. -0.1 N.D. -0.1 -0.8
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 N.D. -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 N.D. -0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 N.D. -0.2 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.0 N.D. +0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 N.D. -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 N.D. +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 N.D. +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 N.D. +0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 N.D. +0.4 -0.3
growth on oleic acid YNB Glucose N.D. +0.1 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 N.D. +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 N.D. +0.1 +0.1
auxotrophy YNB Glucose N.D. -0.2 N.D. +0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 N.D. +0.4 -0.2
auxotrophy Dropout Complete N.D. -0.2 N.D. +0.5 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 N.D. +0.5 +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 N.D. +0.7 +0.3
growth on ypd YPD N.D. +0.1 N.D. +0.5 +0.4
remove
mRNA_6521
plot		 remove
mRNA_6522
plot		 remove
mRNA_6523		 remove
mRNA_6524
plot		 remove
mRNA_6525
plot