Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14896 and 14897 are separated by 297 nucleotides14897 and 14898 are separated by 1115 nucleotides14898 and 14899 are separated by 379 nucleotides14899 and 14900 are separated by 574 nucleotides mRNA_6528: 14896 - K01514 PRUNE, PPX1 exopolyphosphatase, at 1,007,263 to 1,008,621 14896 mRNA_6529: 14897 - K03626 EGD2, NACA nascent polypeptide-associated complex subunit alpha, at 1,008,919 to 1,009,693 14897 mRNA_6530: 14898 - K03809 wrbA NAD(P)H dehydrogenase (quinone), at 1,010,809 to 1,011,597 14898 mRNA_6531: 14899 - K19940 SEC2 Rab guanine nucleotide exchange factor SEC2, at 1,011,977 to 1,014,833 14899 mRNA_6532: 14900 - K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12, at 1,015,408 to 1,016,084 14900
Group Condition mRNA_6528 mRNA_6529 mRNA_6530 mRNA_6531 mRNA_6532
14896 14897 14898 14899 14900
facs on lipid accumulation Sorted High BODIPY Gate -1.9 -0.7 -0.4 -1.5 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 +0.3 +0.4 -1.2 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 +0.0 +0.6 -0.7 -2.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.2 -0.8 -0.4 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -1.2 -0.5 +0.8 -1.5 +0.4
growth on oleic acid YNB Glucose -1.4 +0.1 -0.3 +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.7 -0.4 +0.6 -0.0 -0.3
growth on oleic acid YNB Oleic Acid -0.2 +0.8 -0.1 -0.2 -1.2
facs on lipid accumulation Sorted Low BODIPY Gate +1.2 -1.0 +0.1 -0.6 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 -0.3 -0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.8 -0.4 -0.4 +0.3
growth on ypd YPD -1.2 +0.1 +0.3 +0.1 +0.4
auxotrophy Dropout Complete -0.9 +0.6 -0.2 +0.6 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 -0.0 -0.4 +0.4
auxotrophy YNB Glucose -0.2 +0.5 -0.2 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.6 -0.1 +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.3 -0.3 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 +0.3 -0.4 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.0 +0.4 -0.4 +1.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.1 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 -0.3 +0.9 +0.3 +1.3
remove
mRNA_6528
plot
remove
mRNA_6529
plot
remove
mRNA_6530
remove
mRNA_6531
plot
remove
mRNA_6532
plot