Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14900 and 14901 are separated by 522 nucleotides14901 and 14902 are separated by 685 nucleotides14902 and 14903 are separated by 1142 nucleotides14903 and 14904 are separated by 393 nucleotides mRNA_6532: 14900 - K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12, at 1,015,408 to 1,016,084 14900 mRNA_6533: 14901 - Hypothetical Protein, at 1,016,607 to 1,018,087 14901 mRNA_6534: 14902 - HMMPfam-Opy2 protein-PF09463, at 1,018,773 to 1,021,328 14902 mRNA_6535: 14903 - KOG0715 Molecular chaperone (DnaJ superfamily), at 1,022,471 to 1,023,493 14903 mRNA_6536: 14904 - HMMPfam-Protein of unknown function (DUF837)-PF05769, at 1,023,887 to 1,025,304 14904
Group Condition mRNA_6532 mRNA_6533 mRNA_6534 mRNA_6535 mRNA_6536
14900 14901 14902 14903 14904
growth on ricinoleic acid YNB Methylricinoleic Acid -2.2 +0.5 -2.3 +0.1 +1.4
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 +0.8 -3.2 +0.1 +1.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.7 -1.0 +0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 -0.6 +0.2 -0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.5 -0.9 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.0 +0.1 -0.9 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.6 -0.6 +0.2 +0.9
growth on oleic acid YNB Oleic Acid -1.2 +0.3 +0.1 -0.1 +1.1
growth on ricinoleic acid YNB Glucose -0.3 -0.1 -0.5 +0.3 +0.8
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 +0.4 +1.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.8 -0.4 -0.4 -0.1
auxotrophy YNB Glucose -0.0 -0.0 -0.3 -0.1 +0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.0 +1.6 -0.9 -0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 -0.6 +0.4 +0.8
ypd buoyancy 40 hrs High Buoyancy +0.3 +1.2 -0.2 +0.0 -0.3
auxotrophy Dropout Complete -0.2 -0.2 +0.8 -0.1 +1.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.7 +0.2 +0.5 +0.2
growth on oleic acid YNB Glucose -0.1 +0.3 +0.2 +0.1 +0.8
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.4 +0.3 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.3 +0.3 -0.7 +0.0 +0.8
growth on ypd YPD +0.4 +2.2 -0.9 +0.2 +0.3
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