Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14906 and 14907 are separated by 316 nucleotides14907 and 14908 are separated by 586 nucleotides14908 and 14909 are separated by 807 nucleotides14909 and 14910 are separated by 332 nucleotides mRNA_6538: 14906 - BLAST AGC/AKT protein kinase [Microbotryum lychnidis-dioica..., at 1,027,896 to 1,028,222 14906 mRNA_6539: 14907 - K19800 SCH9 serine/threonine protein kinase SCH9, at 1,028,539 to 1,031,379 14907 mRNA_6540: 14908 - K00838 ARO8 aromatic amino acid aminotransferase I, at 1,031,966 to 1,033,668 14908 mRNA_6541: 14909 - K14819 DUSP12, YVH1 dual specificity phosphatase 12, at 1,034,476 to 1,036,379 14909 mRNA_6542: 14910 - BLAST WSC domain containing protein [Zymoseptoria brevis], at 1,036,712 to 1,039,171 14910
Group Condition mRNA_6538 mRNA_6539 mRNA_6540 mRNA_6541 mRNA_6542
14906 14907 14908 14909 14910
facs on lipid accumulation Sorted High BODIPY Gate -2.3 -3.3 -0.2 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -1.1 -2.7 -0.1 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -1.3 -0.0 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.9 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.6 -0.1 N.D. +0.0
growth on ypd YPD -0.3 -0.1 -0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 +0.1 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 +0.6 N.D. -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.0 +0.2 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.3 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 +0.0 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 +0.4 N.D. -0.1
growth on oleic acid YNB Glucose +0.5 +0.5 -0.2 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.7 +0.0 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.7 +0.1 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.9 +0.6 -0.3 N.D. +0.2
auxotrophy YNB Glucose +0.5 +0.9 +0.3 N.D. +0.0
auxotrophy Dropout Complete +0.6 +0.9 +0.4 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.4 +1.6 +0.1 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +1.5 +0.2 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 +1.9 +0.2 N.D. -0.1
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