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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14910 and 14911 are separated by 421 nucleotides
14911 and 14912 are separated by 695 nucleotides
14912 and 14913 are separated by 1004 nucleotides
14913 and 14914 are separated by 420 nucleotides
mRNA_6542: 14910 - BLAST WSC domain containing protein [Zymoseptoria brevis], at 1,036,712 to 1,039,171
14910
mRNA_6543: 14911 - K08712 ABCG2.SNQ2 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2, at 1,039,593 to 1,046,261
14911
mRNA_6544: 14912 - K02138 ATPeF0D, ATP5H, ATP7 F-type H+-transporting ATPase subunit d, at 1,046,957 to 1,048,093
14912
mRNA_6545: 14913 - SUPERFAMILY--SSF103657, at 1,049,098 to 1,050,167
14913
mRNA_6546: 14914 - K01702 LEU1 3-isopropylmalate dehydratase, at 1,050,588 to 1,053,356
14914
Group
Condition
mRNA
_6542
mRNA
_6543
mRNA
_6544
mRNA
_6545
mRNA
_6546
14910
14911
14912
14913
14914
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-2.3
N.D.
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-1.3
N.D.
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.4
N.D.
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
N.D.
-0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
N.D.
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.0
N.D.
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
N.D.
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.1
N.D.
-0.2
N.D.
auxotrophy
YNB Glucose
+0.0
+0.0
N.D.
-0.1
N.D.
growth on ypd
YPD
-0.1
+0.2
N.D.
-0.2
N.D.
growth on oleic acid
YNB Glucose
+0.0
-0.1
N.D.
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
+0.0
+0.3
N.D.
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.1
N.D.
+0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.5
N.D.
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.2
N.D.
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
N.D.
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.0
N.D.
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.3
N.D.
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
N.D.
+0.3
N.D.
auxotrophy
Dropout Complete
+0.1
+0.0
N.D.
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.4
N.D.
+0.2
N.D.
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