Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14924 and 14925 are separated by 250 nucleotides14925 and 14926 are separated by 344 nucleotides14926 and 14927 are separated by 44 nucleotides14927 and 14928 are separated by 1054 nucleotides mRNA_6556: 14924 - K14793 RRP9 ribosomal RNA-processing protein 9, at 1,086,461 to 1,088,538 14924 mRNA_6557: 14925 - K13566 NIT2 omega-amidase, at 1,088,789 to 1,090,275 14925 mRNA_6558: 14926 - HMMPfam-Bacterial signalling protein N terminal repeat-PF03707, at 1,090,620 to 1,093,721 14926 mRNA_6559: 14927 - Hypothetical Protein, at 1,093,766 to 1,094,365 14927 mRNA_6560: 14928 - Hypothetical Protein, at 1,095,420 to 1,097,567 14928
Group Condition mRNA_6556 mRNA_6557 mRNA_6558 mRNA_6559 mRNA_6560
14924 14925 14926 14927 14928
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 +0.1 +0.1 -1.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 -1.1 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 +0.2 +0.1 -1.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.0 +0.2 -0.7
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.3 +0.1 -0.2
growth on oleic acid YNB Glucose N.D. -0.2 -0.3 +0.1 -0.3
auxotrophy Dropout Complete N.D. -0.2 -0.5 +0.1 -0.1
auxotrophy YNB Glucose N.D. +0.1 -0.4 +0.1 -0.3
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.2 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.0 +0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.4 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 -0.1 +0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 +0.1 +0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.1 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.2 +0.1 -0.3
growth on ypd YPD N.D. -0.2 +0.5 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 -0.1 -0.1 +1.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.0 +0.0 +1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.2 -0.2 +1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 +0.1 -0.1 +1.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 +0.6 -0.1 +0.9
remove
mRNA_6556
plot
remove
mRNA_6557
plot
remove
mRNA_6558
remove
mRNA_6559
plot
remove
mRNA_6560
plot