Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14925 and 14926 are separated by 344 nucleotides
14926 and 14927 are separated by 44 nucleotides
14927 and 14928 are separated by 1054 nucleotides
14928 and 14929 are separated by 187 nucleotides
mRNA_6557: 14925 - K13566 NIT2 omega-amidase, at 1,088,789 to 1,090,275
14925
mRNA_6558: 14926 - HMMPfam-Bacterial signalling protein N terminal repeat-PF03707, at 1,090,620 to 1,093,721
14926
mRNA_6559: 14927 - Hypothetical Protein, at 1,093,766 to 1,094,365
14927
mRNA_6560: 14928 - Hypothetical Protein, at 1,095,420 to 1,097,567
14928
mRNA_6561: 14929 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1,097,755 to 1,099,041
14929
Group
Condition
mRNA
_6557
mRNA
_6558
mRNA
_6559
mRNA
_6560
mRNA
_6561
14925
14926
14927
14928
14929
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-1.1
+0.1
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.2
+0.1
-1.5
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.1
+0.1
-1.7
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.0
+0.2
-0.7
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.3
+0.1
-0.3
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
+0.1
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.1
+0.2
-0.4
-0.3
auxotrophy
Dropout Complete
-0.2
-0.5
+0.1
-0.1
-0.0
auxotrophy
YNB Glucose
+0.1
-0.4
+0.1
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.4
+0.1
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
+0.1
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
+0.1
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
+0.2
-0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.0
+0.1
-0.6
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.2
+0.1
-0.3
+0.0
growth on ypd
YPD
-0.2
+0.5
+0.0
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.1
-0.1
+1.5
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.2
-0.2
+1.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.1
-0.1
+1.4
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.0
+0.0
+1.2
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.6
-0.1
+0.9
+0.0
remove
mRNA_6557
plot
remove
mRNA_6558
plot
remove
mRNA_6559
remove
mRNA_6560
plot
remove
mRNA_6561
plot