Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14928 and 14929 are separated by 187 nucleotides
14929 and 14930 are separated by 160 nucleotides
14930 and 14931 are separated by 2441 nucleotides
14931 and 14932 are separated by 334 nucleotides
mRNA_6560: 14928 - Hypothetical Protein, at 1,095,420 to 1,097,567
14928
mRNA_6561: 14929 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1,097,755 to 1,099,041
14929
mRNA_6562: 14930 - K20353 SEC16 COPII coat assembly protein SEC16, at 1,099,202 to 1,104,647
14930
mRNA_6563: 14931 - Hypothetical Protein, at 1,107,089 to 1,108,323
14931
mRNA_6564: 14932 - Hypothetical Protein, at 1,108,658 to 1,110,083
14932
Group
Condition
mRNA
_6560
mRNA
_6561
mRNA
_6562
mRNA
_6563
mRNA
_6564
14928
14929
14930
14931
14932
ypd buoyancy
40 hrs No Buoyancy Separation
-1.5
-0.0
-1.6
-1.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.0
-2.1
+0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
-1.8
+0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.9
+0.0
-1.5
-0.1
-0.1
growth on oleic acid
YNB Glucose
-0.3
-0.1
+0.8
-0.3
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.3
+0.7
-0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
+0.4
-0.2
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.6
+0.2
+0.6
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.7
+0.2
+2.0
+0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
-0.1
+1.6
-0.4
-0.2
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
+1.2
-0.3
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.0
+0.6
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.0
+0.7
-0.0
+0.1
auxotrophy
YNB Glucose
-0.3
-0.0
+1.0
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
+0.9
+0.0
-0.2
auxotrophy
Dropout Complete
-0.1
-0.0
+0.8
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.3
-0.0
+0.1
+0.1
-0.2
growth on ypd
YPD
-0.1
+0.4
+0.5
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.4
+0.0
+0.3
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.2
+0.3
+0.3
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.5
-0.1
+0.6
-0.1
+0.1
remove
mRNA_6560
plot
remove
mRNA_6561
plot
remove
mRNA_6562
remove
mRNA_6563
plot
remove
mRNA_6564
plot