Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14931 and 14932 are separated by 334 nucleotides14932 and 14933 are separated by 31 nucleotides14933 and 14934 are separated by 100 nucleotides14934 and 14935 are separated by 283 nucleotides mRNA_6563: 14931 - Hypothetical Protein, at 1,107,089 to 1,108,323 14931 mRNA_6564: 14932 - Hypothetical Protein, at 1,108,658 to 1,110,083 14932 mRNA_6565: 14933 - SUPERFAMILY--SSF52777, at 1,110,115 to 1,112,208 14933 mRNA_6566: 14934 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1,112,309 to 1,113,884 14934 mRNA_6567: 14935 - KOG2662 Magnesium transporters CorA family, at 1,114,168 to 1,116,354 14935
Group Condition mRNA_6563 mRNA_6564 mRNA_6565 mRNA_6566 mRNA_6567
14931 14932 14933 14934 14935
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 +0.2 +0.1 +0.0 -0.8
growth on oleic acid YNB Glucose -0.3 -0.5 -0.0 -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2 -0.1 +0.2 -0.1
auxotrophy YNB Glucose -0.1 +0.0 -0.0 -0.2 -0.4
growth on oleic acid YNB Oleic Acid -0.3 -0.4 +0.2 -0.5 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.6 +0.1 +0.1 -0.3
growth on ricinoleic acid YNB Glucose +0.0 -0.2 -0.0 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -0.0 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.2 -0.3 +0.2 -0.2
auxotrophy Dropout Complete -0.2 +0.4 +0.2 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 -0.0 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.0 -0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 +0.2 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 +0.1 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 +0.1 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 -0.2 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 -0.2 -0.1 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.3 -0.2 -0.1 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.1 +0.1 +0.1 +0.2
growth on ypd YPD +0.4 +0.1 +0.0 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 +0.0 +0.1 +0.3
remove
mRNA_6563
plot
remove
mRNA_6564
plot
remove
mRNA_6565
remove
mRNA_6566
plot
remove
mRNA_6567
plot