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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14931 and 14932 are separated by 334 nucleotides
14932 and 14933 are separated by 31 nucleotides
14933 and 14934 are separated by 100 nucleotides
14934 and 14935 are separated by 283 nucleotides
mRNA_6563: 14931 - Hypothetical Protein, at 1,107,089 to 1,108,323
14931
mRNA_6564: 14932 - Hypothetical Protein, at 1,108,658 to 1,110,083
14932
mRNA_6565: 14933 - SUPERFAMILY--SSF52777, at 1,110,115 to 1,112,208
14933
mRNA_6566: 14934 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1,112,309 to 1,113,884
14934
mRNA_6567: 14935 - KOG2662 Magnesium transporters CorA family, at 1,114,168 to 1,116,354
14935
Group
Condition
mRNA
_6563
mRNA
_6564
mRNA
_6565
mRNA
_6566
mRNA
_6567
14931
14932
14933
14934
14935
ypd buoyancy
40 hrs No Buoyancy Separation
-1.4
+0.2
+0.1
+0.0
-0.8
growth on oleic acid
YNB Glucose
-0.3
-0.5
-0.0
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.2
-0.1
+0.2
-0.1
auxotrophy
YNB Glucose
-0.1
+0.0
-0.0
-0.2
-0.4
growth on oleic acid
YNB Oleic Acid
-0.3
-0.4
+0.2
-0.5
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.6
+0.1
+0.1
-0.3
growth on ricinoleic acid
YNB Glucose
+0.0
-0.2
-0.0
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
-0.0
+0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
-0.3
+0.2
-0.2
auxotrophy
Dropout Complete
-0.2
+0.4
+0.2
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.2
-0.0
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.0
-0.1
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.1
+0.2
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.1
+0.1
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.2
+0.1
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
-0.2
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
-0.2
-0.1
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.3
-0.2
-0.1
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.1
+0.1
+0.1
+0.2
growth on ypd
YPD
+0.4
+0.1
+0.0
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.2
+0.0
+0.1
+0.3
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