Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14937 and 14938 are separated by 350 nucleotides14938 and 14939 are separated by 970 nucleotides14939 and 14940 are separated by 337 nucleotides14940 and 14941 are separated by 275 nucleotides mRNA_6569: 14937 - K02978 RP-S27e, RPS27 small subunit ribosomal protein S27e, at 1,122,107 to 1,122,716 14937 mRNA_6570: 14938 - K09184 GATAF GATA-binding protein, other eukaryote, at 1,123,067 to 1,127,630 14938 mRNA_6571: 14939 - K11790 DTL, CDT2, DCAF2 denticleless, at 1,128,601 to 1,130,974 14939 mRNA_6572: 14940 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928, at 1,131,312 to 1,136,542 14940 mRNA_6573: 14941 - K20472 COPZ, RET3 coatomer subunit zeta, at 1,136,818 to 1,137,633 14941
Group Condition mRNA_6569 mRNA_6570 mRNA_6571 mRNA_6572 mRNA_6573
14937 14938 14939 14940 14941
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.6 -0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 -0.7 -0.1 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.0 -1.0 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.6 -0.2 -0.0 N.D.
auxotrophy YNB Glucose N.D. +0.0 -0.9 +0.0 N.D.
growth on oleic acid YNB Glucose N.D. -0.3 -0.5 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 -0.7 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.9 +0.1 N.D.
growth on ypd YPD N.D. +0.2 -0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.5 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.2 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 -0.5 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.8 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.6 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.2 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.3 +0.1 N.D.
auxotrophy Dropout Complete N.D. +0.4 -0.7 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.1 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.3 +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 +0.6 +0.1 N.D.
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