Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14938 and 14939 are separated by 970 nucleotides14939 and 14940 are separated by 337 nucleotides14940 and 14941 are separated by 275 nucleotides14941 and 14942 are separated by 320 nucleotides mRNA_6570: 14938 - K09184 GATAF GATA-binding protein, other eukaryote, at 1,123,067 to 1,127,630 14938 mRNA_6571: 14939 - K11790 DTL, CDT2, DCAF2 denticleless, at 1,128,601 to 1,130,974 14939 mRNA_6572: 14940 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928, at 1,131,312 to 1,136,542 14940 mRNA_6573: 14941 - K20472 COPZ, RET3 coatomer subunit zeta, at 1,136,818 to 1,137,633 14941 mRNA_6574: 14942 - K18258 CRYM thiomorpholine-carboxylate dehydrogenase, at 1,137,954 to 1,139,326 14942
Group Condition mRNA_6570 mRNA_6571 mRNA_6572 mRNA_6573 mRNA_6574
14938 14939 14940 14941 14942
auxotrophy YNB Glucose +0.0 -0.9 +0.0 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.7 -0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.7 +0.0 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.9 +0.1 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.4 -0.1 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.2 -0.0 N.D. -0.2
growth on oleic acid YNB Glucose -0.3 -0.5 -0.0 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.8 +0.3 N.D. -0.5
growth on oleic acid YNB Oleic Acid -0.0 -1.0 +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.5 -0.1 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.2 N.D. -0.2
auxotrophy Dropout Complete +0.4 -0.7 +0.3 N.D. -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 -0.1 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 +0.2 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.3 +0.1 N.D. -0.3
growth on ypd YPD +0.2 -0.5 -0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 +0.2 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.6 +0.2 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.3 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.6 +0.1 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.3 +0.2 N.D. +0.1
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